Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.32■□□□□ 0.36
Ddx41Q91VN6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Gm13597-201ENSMUST00000121239 375 ntBASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx41Q91VN6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Gm17968-201ENSMUST00000194902 784 ntBASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx41Q91VN6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx41Q91VN6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ddx41Q91VN6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms