Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Tram1Q91V04 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tram1Q91V04 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tram1Q91V04 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tram1Q91V04 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Gm12008-201ENSMUST00000117791 755 ntBASIC12.99□□□□□ -0.33
Tram1Q91V04 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Gm25406-201ENSMUST00000157599 105 ntBASIC12.99□□□□□ -0.33
Tram1Q91V04 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.99□□□□□ -0.33
Tram1Q91V04 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.99□□□□□ -0.33
Tram1Q91V04 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Tram1Q91V04 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.99□□□□□ -0.33
Tram1Q91V04 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tram1Q91V04 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Tram1Q91V04 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tram1Q91V04 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tram1Q91V04 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.98□□□□□ -0.33
Tram1Q91V04 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Mir5130-201ENSMUST00000175160 84 ntBASIC12.98□□□□□ -0.33
Tram1Q91V04 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.98□□□□□ -0.33
Tram1Q91V04 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.98□□□□□ -0.33
Tram1Q91V04 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.98□□□□□ -0.33
Tram1Q91V04 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tram1Q91V04 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tram1Q91V04 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tram1Q91V04 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tram1Q91V04 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tram1Q91V04 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tram1Q91V04 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.97□□□□□ -0.33
Tram1Q91V04 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.97□□□□□ -0.33
Tram1Q91V04 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tram1Q91V04 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tram1Q91V04 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.97□□□□□ -0.33
Tram1Q91V04 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.97□□□□□ -0.33
Tram1Q91V04 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Tram1Q91V04 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Tram1Q91V04 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tram1Q91V04 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tram1Q91V04 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tram1Q91V04 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.96□□□□□ -0.33
Tram1Q91V04 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tram1Q91V04 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Tram1Q91V04 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tram1Q91V04 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tram1Q91V04 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms