Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.65■□□□□ 0.42
StrcQ8VIM6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.65■□□□□ 0.42
StrcQ8VIM6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
StrcQ8VIM6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
StrcQ8VIM6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.64■□□□□ 0.42
StrcQ8VIM6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.64■□□□□ 0.41
StrcQ8VIM6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Gm18307-201ENSMUST00000206864 949 ntBASIC17.64■□□□□ 0.41
StrcQ8VIM6 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.64■□□□□ 0.41
StrcQ8VIM6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
StrcQ8VIM6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
StrcQ8VIM6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Gm45784-201ENSMUST00000188360 142 ntBASIC17.63■□□□□ 0.41
StrcQ8VIM6 Gm9182-201ENSMUST00000217829 639 ntBASIC17.63■□□□□ 0.41
StrcQ8VIM6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.63■□□□□ 0.41
StrcQ8VIM6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Gm18827-201ENSMUST00000188341 790 ntBASIC17.63■□□□□ 0.41
StrcQ8VIM6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
StrcQ8VIM6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.62■□□□□ 0.41
StrcQ8VIM6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Gm8749-201ENSMUST00000117737 331 ntBASIC17.62■□□□□ 0.41
StrcQ8VIM6 Gm17795-201ENSMUST00000214505 757 ntBASIC17.62■□□□□ 0.41
StrcQ8VIM6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.62■□□□□ 0.41
StrcQ8VIM6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
StrcQ8VIM6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms