Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TraipQ8VIG6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TraipQ8VIG6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TraipQ8VIG6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TraipQ8VIG6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TraipQ8VIG6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Gm9824-201ENSMUST00000178707 561 ntBASIC16.01■□□□□ 0.15
TraipQ8VIG6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.01■□□□□ 0.15
TraipQ8VIG6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.01■□□□□ 0.15
TraipQ8VIG6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TraipQ8VIG6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TraipQ8VIG6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
TraipQ8VIG6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16■□□□□ 0.15
TraipQ8VIG6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16■□□□□ 0.15
TraipQ8VIG6 Gm15483-201ENSMUST00000120338 456 ntBASIC16■□□□□ 0.15
TraipQ8VIG6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16■□□□□ 0.15
TraipQ8VIG6 Gm22175-201ENSMUST00000175007 78 ntBASIC16■□□□□ 0.15
TraipQ8VIG6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16■□□□□ 0.15
TraipQ8VIG6 Gm27920-201ENSMUST00000183953 96 ntBASIC16■□□□□ 0.15
TraipQ8VIG6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16■□□□□ 0.15
TraipQ8VIG6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TraipQ8VIG6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TraipQ8VIG6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.99■□□□□ 0.15
TraipQ8VIG6 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.99■□□□□ 0.15
TraipQ8VIG6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.99■□□□□ 0.15
TraipQ8VIG6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.99■□□□□ 0.15
TraipQ8VIG6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
TraipQ8VIG6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TraipQ8VIG6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.98■□□□□ 0.15
TraipQ8VIG6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.98■□□□□ 0.15
TraipQ8VIG6 Mir7023-201ENSMUST00000185093 64 ntBASIC15.98■□□□□ 0.15
TraipQ8VIG6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms