Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr1Q8VHP6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr1Q8VHP6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdhr1Q8VHP6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr1Q8VHP6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr1Q8VHP6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr1Q8VHP6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr1Q8VHP6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr1Q8VHP6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdhr1Q8VHP6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Mir6956-201ENSMUST00000183598 62 ntBASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Gm43125-201ENSMUST00000201724 730 ntBASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdhr1Q8VHP6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdhr1Q8VHP6 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Gm44872-201ENSMUST00000207864 420 ntBASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr1Q8VHP6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cdhr1Q8VHP6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cdhr1Q8VHP6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cdhr1Q8VHP6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdhr1Q8VHP6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdhr1Q8VHP6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdhr1Q8VHP6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdhr1Q8VHP6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms