Protein–RNA interactions for Protein: Q8VCH8

Ubxn4, UBX domain-containing protein 4, mousemouse

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubxn4Q8VCH8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubxn4Q8VCH8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Grk6-207ENSMUST00000225925 2769 ntBASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Celf4-206ENSMUST00000224553 1729 ntBASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.14■□□□□ 0.33
Ubxn4Q8VCH8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Gm13836-201ENSMUST00000121159 501 ntBASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Gm25745-201ENSMUST00000174945 133 ntBASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubxn4Q8VCH8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Gm12497-201ENSMUST00000138778 237 ntBASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Gm10231-201ENSMUST00000181584 441 ntBASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Gm10175-202ENSMUST00000208752 441 ntBASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ubxn4Q8VCH8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Gm15165-201ENSMUST00000118140 502 ntBASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubxn4Q8VCH8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms