Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Gm18195-201ENSMUST00000207604 706 ntBASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Gm8655-201ENSMUST00000221159 852 ntBASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf8Q8VC56 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm4459-201ENSMUST00000118750 468 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm8825-201ENSMUST00000182565 998 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm4518-201ENSMUST00000182638 718 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf8Q8VC56 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms