Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rpap2Q8VC34 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Gm2272-201ENSMUST00000194903 582 ntBASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Gm5364-201ENSMUST00000216789 889 ntBASIC16.53■□□□□ 0.24
Rpap2Q8VC34 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rpap2Q8VC34 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rpap2Q8VC34 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rpap2Q8VC34 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpap2Q8VC34 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Rpap2Q8VC34 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpap2Q8VC34 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rpap2Q8VC34 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Gm9727-201ENSMUST00000161387 555 ntBASIC16.51■□□□□ 0.23
Rpap2Q8VC34 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Gm44771-201ENSMUST00000206975 626 ntBASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Rpap2Q8VC34 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpap2Q8VC34 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms