Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Gm9279-201ENSMUST00000223175 1606 ntBASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Gm11405-201ENSMUST00000118689 1556 ntBASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc9Q8VC31 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc9Q8VC31 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Gm38346-201ENSMUST00000192379 2639 ntBASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc9Q8VC31 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc9Q8VC31 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc9Q8VC31 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc9Q8VC31 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Gm18041-201ENSMUST00000218210 618 ntBASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc9Q8VC31 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms