Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Gm23547-201ENSMUST00000158210 271 ntBASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Matn2-206ENSMUST00000228570 2798 ntBASIC15.28■□□□□ 0.04
Slf1Q8R3P9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slf1Q8R3P9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 Gm5587-201ENSMUST00000206270 674 ntBASIC15.27■□□□□ 0.04
Slf1Q8R3P9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slf1Q8R3P9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.27■□□□□ 0.03
Slf1Q8R3P9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Slf1Q8R3P9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.27■□□□□ 0.03
Slf1Q8R3P9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slf1Q8R3P9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slf1Q8R3P9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Slf1Q8R3P9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Slf1Q8R3P9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slf1Q8R3P9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Gm10052-201ENSMUST00000168019 960 ntBASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Gm6623-201ENSMUST00000173570 544 ntBASIC15.26■□□□□ 0.03
Slf1Q8R3P9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Gm7729-201ENSMUST00000050143 801 ntBASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slf1Q8R3P9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.25■□□□□ 0.03
Slf1Q8R3P9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Gm13836-201ENSMUST00000121159 501 ntBASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Gm44430-201ENSMUST00000203376 995 ntBASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms