Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Gm45612-201ENSMUST00000211320 160 ntBASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Gm11025-201ENSMUST00000140773 466 ntBASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp40Q8R1F9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Gm16026-204ENSMUST00000162652 683 ntBASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Sybu-209ENSMUST00000228639 4113 ntBASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rpp40Q8R1F9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.1■□□□□ 0.17
Rpp40Q8R1F9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms