Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Gm12260-201ENSMUST00000122447 411 ntBASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Celf4-206ENSMUST00000224553 1729 ntBASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sf3a1Q8K4Z5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sf3a1Q8K4Z5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sf3a1Q8K4Z5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3a1Q8K4Z5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3a1Q8K4Z5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms