Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf4Q8K4J2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf4Q8K4J2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf4Q8K4J2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Gm2274-201ENSMUST00000184539 609 ntBASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf4Q8K4J2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf4Q8K4J2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms