Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Ighv6-1-201ENSMUST00000193612 343 ntBASIC9.5□□□□□ -0.89
Cystm1Q8K353 AC130713.1-201ENSMUST00000228853 1096 ntBASIC9.5□□□□□ -0.89
Cystm1Q8K353 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Cystm1Q8K353 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC9.5□□□□□ -0.89
Cystm1Q8K353 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Cystm1Q8K353 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 AC154855.1-201ENSMUST00000227353 1458 ntBASIC9.49□□□□□ -0.89
Cystm1Q8K353 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Gm29518-201ENSMUST00000190858 372 ntBASIC9.49□□□□□ -0.89
Cystm1Q8K353 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cystm1Q8K353 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Cystm1Q8K353 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Gm11950-201ENSMUST00000121615 838 ntBASIC9.48□□□□□ -0.89
Cystm1Q8K353 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cystm1Q8K353 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms