Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rftn2Q8CHX7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Gm15483-201ENSMUST00000120338 456 ntBASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Gm10253-201ENSMUST00000194270 940 ntBASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Gm44872-201ENSMUST00000207864 420 ntBASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.96■□□□□ 0.15
Rftn2Q8CHX7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rftn2Q8CHX7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rftn2Q8CHX7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rftn2Q8CHX7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rftn2Q8CHX7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rftn2Q8CHX7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.14
Rftn2Q8CHX7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Mir449b-201ENSMUST00000104833 80 ntBASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Gm13616-201ENSMUST00000120600 222 ntBASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Gm24158-201ENSMUST00000175263 71 ntBASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rftn2Q8CHX7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rftn2Q8CHX7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rftn2Q8CHX7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rftn2Q8CHX7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rftn2Q8CHX7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.94■□□□□ 0.14
Rftn2Q8CHX7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rftn2Q8CHX7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rftn2Q8CHX7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rftn2Q8CHX7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rftn2Q8CHX7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rftn2Q8CHX7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms