Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.46□□□□□ -0.25
ShfQ8CG80 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ShfQ8CG80 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
ShfQ8CG80 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.46□□□□□ -0.25
ShfQ8CG80 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.46□□□□□ -0.25
ShfQ8CG80 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
ShfQ8CG80 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
ShfQ8CG80 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShfQ8CG80 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShfQ8CG80 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShfQ8CG80 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
ShfQ8CG80 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShfQ8CG80 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.45□□□□□ -0.26
ShfQ8CG80 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ShfQ8CG80 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ShfQ8CG80 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.45□□□□□ -0.26
ShfQ8CG80 Gm11780-201ENSMUST00000136880 516 ntBASIC13.45□□□□□ -0.26
ShfQ8CG80 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.45□□□□□ -0.26
ShfQ8CG80 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ShfQ8CG80 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.45□□□□□ -0.26
ShfQ8CG80 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.45□□□□□ -0.26
ShfQ8CG80 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ShfQ8CG80 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShfQ8CG80 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
ShfQ8CG80 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.44□□□□□ -0.26
ShfQ8CG80 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.44□□□□□ -0.26
ShfQ8CG80 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.44□□□□□ -0.26
ShfQ8CG80 Gm18489-201ENSMUST00000172565 551 ntBASIC13.44□□□□□ -0.26
ShfQ8CG80 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.44□□□□□ -0.26
ShfQ8CG80 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.44□□□□□ -0.26
ShfQ8CG80 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ShfQ8CG80 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
ShfQ8CG80 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.43□□□□□ -0.26
ShfQ8CG80 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ShfQ8CG80 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.43□□□□□ -0.26
ShfQ8CG80 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.43□□□□□ -0.26
ShfQ8CG80 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ShfQ8CG80 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms