Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Gm11780-201ENSMUST00000136880 516 ntBASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Gm18206-201ENSMUST00000207027 926 ntBASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vcpip1Q8CDG3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vcpip1Q8CDG3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vcpip1Q8CDG3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vcpip1Q8CDG3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vcpip1Q8CDG3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Vcpip1Q8CDG3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vcpip1Q8CDG3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Gm12134-201ENSMUST00000122109 520 ntBASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Gm8318-201ENSMUST00000182954 872 ntBASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vcpip1Q8CDG3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Gm4535-201ENSMUST00000182274 558 ntBASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Gm27646-201ENSMUST00000183989 110 ntBASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Gm6296-201ENSMUST00000222599 943 ntBASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.18■□□□□ 0.18
Vcpip1Q8CDG3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms