Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Gm27646-201ENSMUST00000183989 110 ntBASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps53Q8CCB4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Grk6-207ENSMUST00000225925 2769 ntBASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Auts2-212ENSMUST00000178555 309 ntBASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps53Q8CCB4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Vps53Q8CCB4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps53Q8CCB4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps53Q8CCB4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps53Q8CCB4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps53Q8CCB4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps53Q8CCB4 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.52■□□□□ 0.39
Vps53Q8CCB4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Gm15920-201ENSMUST00000118998 402 ntBASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.51■□□□□ 0.39
Vps53Q8CCB4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Vps53Q8CCB4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms