Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Gm18622-201ENSMUST00000219361 595 ntBASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Lysmd4Q8CC84 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lysmd4Q8CC84 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lysmd4Q8CC84 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Rprl3-201ENSMUST00000157400 290 ntBASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Mir3081-201ENSMUST00000175305 84 ntBASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lysmd4Q8CC84 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Lysmd4Q8CC84 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms