Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Gm14822-201ENSMUST00000122247 291 ntBASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Gm8749-201ENSMUST00000117737 331 ntBASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Mir1895-201ENSMUST00000122615 79 ntBASIC17.55■□□□□ 0.4
Alx1Q8C8B0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Chchd1-203ENSMUST00000224633 557 ntBASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx1Q8C8B0 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Gm23935-201ENSMUST00000102303 57 ntBASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Gm24270-201ENSMUST00000102326 57 ntBASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Gm6973-201ENSMUST00000117080 721 ntBASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Gm24245-201ENSMUST00000157318 57 ntBASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Gm6736-201ENSMUST00000166583 948 ntBASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Alx1Q8C8B0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Gm15483-201ENSMUST00000120338 456 ntBASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Gm11745-201ENSMUST00000121669 448 ntBASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Gm43575-201ENSMUST00000196420 516 ntBASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Gm18057-201ENSMUST00000208220 503 ntBASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx1Q8C8B0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms