Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Gm43767-201ENSMUST00000198933 381 ntBASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc60Q8C4J0 Gm10584-201ENSMUST00000207036 2628 ntBASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Gm15467-201ENSMUST00000120582 445 ntBASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc60Q8C4J0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Gm14780-201ENSMUST00000118387 2737 ntBASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Gm14494-201ENSMUST00000118786 435 ntBASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc60Q8C4J0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Gm45747-201ENSMUST00000212203 999 ntBASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc60Q8C4J0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms