Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Gm7488-201ENSMUST00000117148 684 ntBASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Gm2810-201ENSMUST00000118681 990 ntBASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Gm18737-201ENSMUST00000173594 937 ntBASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Gm38225-201ENSMUST00000194001 393 ntBASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptcd1Q8C2E4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptcd1Q8C2E4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ptcd1Q8C2E4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ptcd1Q8C2E4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.52■□□□□ 0.55
Ptcd1Q8C2E4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Gm10499-201ENSMUST00000174094 934 ntBASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Syt7-205ENSMUST00000224135 1557 ntBASIC18.51■□□□□ 0.55
Ptcd1Q8C2E4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptcd1Q8C2E4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Gm14722-201ENSMUST00000118943 689 ntBASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Gm16215-201ENSMUST00000161990 637 ntBASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptcd1Q8C2E4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ptcd1Q8C2E4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms