Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3rf3Q8C120 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Sh3rf3Q8C120 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh3rf3Q8C120 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh3rf3Q8C120 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh3rf3Q8C120 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh3rf3Q8C120 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.71■□□□□ 0.1
Sh3rf3Q8C120 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh3rf3Q8C120 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Gm27628-201ENSMUST00000184911 107 ntBASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Mzt1-203ENSMUST00000227948 952 ntBASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3rf3Q8C120 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Gm11764-201ENSMUST00000120221 623 ntBASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 Mir5126-201ENSMUST00000175513 77 ntBASIC15.69■□□□□ 0.1
Sh3rf3Q8C120 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms