Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chmp2bQ8BJF9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chmp2bQ8BJF9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Chmp2bQ8BJF9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chmp2bQ8BJF9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Chmp2bQ8BJF9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Chmp2bQ8BJF9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Chmp2bQ8BJF9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Chmp2bQ8BJF9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms