Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.58□□□□□ -0.07
Rnf38Q8BI21 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf38Q8BI21 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf38Q8BI21 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.58□□□□□ -0.07
Rnf38Q8BI21 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf38Q8BI21 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Gm12895-201ENSMUST00000122214 226 ntBASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Gm10819-201ENSMUST00000099988 561 ntBASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.58□□□□□ -0.08
Rnf38Q8BI21 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf38Q8BI21 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Gm8344-201ENSMUST00000119813 856 ntBASIC14.57□□□□□ -0.08
Rnf38Q8BI21 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf38Q8BI21 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Celf4-206ENSMUST00000224553 1729 ntBASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Gm12497-201ENSMUST00000138778 237 ntBASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Gm8318-201ENSMUST00000182954 872 ntBASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Gm28033-201ENSMUST00000184224 96 ntBASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf38Q8BI21 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf38Q8BI21 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms