Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Gm13168-201ENSMUST00000121771 632 ntBASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Gm9987-201ENSMUST00000069768 567 ntBASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.22□□□□□ -0.29
Slc5a7Q8BGY9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Gm10653-202ENSMUST00000139570 835 ntBASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Gm27011-201ENSMUST00000182352 972 ntBASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc5a7Q8BGY9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Slc5a7Q8BGY9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc5a7Q8BGY9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc5a7Q8BGY9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc5a7Q8BGY9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc5a7Q8BGY9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc5a7Q8BGY9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc5a7Q8BGY9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc5a7Q8BGY9 Gm25406-201ENSMUST00000157599 105 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms