Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.55□□□□□ -0.08
Trim23Q8BGX0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim23Q8BGX0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim23Q8BGX0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim23Q8BGX0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim23Q8BGX0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Gm15427-201ENSMUST00000117288 531 ntBASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Gm43767-201ENSMUST00000198933 381 ntBASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim23Q8BGX0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms