Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh8Q7TSK3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh8Q7TSK3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh8Q7TSK3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh8Q7TSK3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms