Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Gm44719-201ENSMUST00000206404 149 ntBASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShprhQ7TPQ3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 AC238811.3-201ENSMUST00000225422 709 ntBASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShprhQ7TPQ3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Mir7085-201ENSMUST00000184353 66 ntBASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ShprhQ7TPQ3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ShprhQ7TPQ3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC21.02■□□□□ 0.95
ShprhQ7TPQ3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
ShprhQ7TPQ3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC21.02■□□□□ 0.95
ShprhQ7TPQ3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ShprhQ7TPQ3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ShprhQ7TPQ3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShprhQ7TPQ3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Gm11478-201ENSMUST00000117851 599 ntBASIC21■□□□□ 0.95
ShprhQ7TPQ3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Gm9115-201ENSMUST00000120192 1348 ntBASIC21■□□□□ 0.95
ShprhQ7TPQ3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ShprhQ7TPQ3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ShprhQ7TPQ3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC20.99■□□□□ 0.95
ShprhQ7TPQ3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC20.99■□□□□ 0.95
ShprhQ7TPQ3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ShprhQ7TPQ3 Gm33320-201ENSMUST00000192232 530 ntBASIC20.99■□□□□ 0.95
ShprhQ7TPQ3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC20.99■□□□□ 0.95
ShprhQ7TPQ3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.99■□□□□ 0.95
ShprhQ7TPQ3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms