Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.3□□□□□ -0.44
Vma21Q78T54 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vma21Q78T54 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.3□□□□□ -0.44
Vma21Q78T54 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vma21Q78T54 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.29□□□□□ -0.44
Vma21Q78T54 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Gm13836-201ENSMUST00000121159 501 ntBASIC12.29□□□□□ -0.44
Vma21Q78T54 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Gm27867-201ENSMUST00000184778 125 ntBASIC12.29□□□□□ -0.44
Vma21Q78T54 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vma21Q78T54 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Gm8655-201ENSMUST00000221159 852 ntBASIC12.29□□□□□ -0.44
Vma21Q78T54 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vma21Q78T54 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Efs-202ENSMUST00000227037 2540 ntBASIC12.29□□□□□ -0.44
Vma21Q78T54 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vma21Q78T54 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vma21Q78T54 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Mir7071-201ENSMUST00000184847 69 ntBASIC12.28□□□□□ -0.44
Vma21Q78T54 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.28□□□□□ -0.44
Vma21Q78T54 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vma21Q78T54 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vma21Q78T54 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms