Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Npc1l1Q6T3U4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Mir449b-201ENSMUST00000104833 80 ntBASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Nudt18-203ENSMUST00000228768 1578 ntBASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Npc1l1Q6T3U4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Gm16026-204ENSMUST00000162652 683 ntBASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Gm18057-201ENSMUST00000208220 503 ntBASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Npc1l1Q6T3U4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Gm25287-201ENSMUST00000103846 110 ntBASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Gm22918-201ENSMUST00000103855 110 ntBASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Gm5186-201ENSMUST00000218781 920 ntBASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Npc1l1Q6T3U4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms