Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Gm27920-201ENSMUST00000183953 96 ntBASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ddx58Q6Q899 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx58Q6Q899 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ddx58Q6Q899 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx58Q6Q899 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx58Q6Q899 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx58Q6Q899 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx58Q6Q899 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
Ddx58Q6Q899 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx58Q6Q899 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx58Q6Q899 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx58Q6Q899 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ddx58Q6Q899 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx58Q6Q899 AA543401-201ENSMUST00000164248 1269 ntBASIC18.58■□□□□ 0.56
Ddx58Q6Q899 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx58Q6Q899 Gm38225-201ENSMUST00000194001 393 ntBASIC18.58■□□□□ 0.56
Ddx58Q6Q899 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx58Q6Q899 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.58■□□□□ 0.56
Ddx58Q6Q899 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx58Q6Q899 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ddx58Q6Q899 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx58Q6Q899 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx58Q6Q899 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx58Q6Q899 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx58Q6Q899 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Ddx58Q6Q899 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Gm22175-201ENSMUST00000175007 78 ntBASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx58Q6Q899 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms