Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.67□□□□□ -0.38
Rif1Q6PR54 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Gm36967-201ENSMUST00000193814 266 ntBASIC12.67□□□□□ -0.38
Rif1Q6PR54 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.66□□□□□ -0.38
Rif1Q6PR54 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Gm5354-201ENSMUST00000182417 973 ntBASIC12.66□□□□□ -0.38
Rif1Q6PR54 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.66□□□□□ -0.38
Rif1Q6PR54 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.66□□□□□ -0.38
Rif1Q6PR54 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.66□□□□□ -0.38
Rif1Q6PR54 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rif1Q6PR54 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Rif1Q6PR54 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.65□□□□□ -0.38
Rif1Q6PR54 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rif1Q6PR54 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rif1Q6PR54 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rif1Q6PR54 Gm23931-201ENSMUST00000103842 109 ntBASIC12.64□□□□□ -0.39
Rif1Q6PR54 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Rif1Q6PR54 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.64□□□□□ -0.39
Rif1Q6PR54 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.64□□□□□ -0.39
Rif1Q6PR54 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rif1Q6PR54 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms