Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.56■□□□□ 0.4
Nup98Q6PFD9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Gm10275-202ENSMUST00000168697 495 ntBASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Gm10275-201ENSMUST00000092620 635 ntBASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Gm27989-201ENSMUST00000184721 107 ntBASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nup98Q6PFD9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Gm16215-201ENSMUST00000161990 637 ntBASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.55■□□□□ 0.4
Nup98Q6PFD9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.55■□□□□ 0.4
Nup98Q6PFD9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Mir1897-201ENSMUST00000122581 272 ntBASIC17.54■□□□□ 0.4
Nup98Q6PFD9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 AA619741-201ENSMUST00000195095 646 ntBASIC17.54■□□□□ 0.4
Nup98Q6PFD9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Mir125a-201ENSMUST00000083545 68 ntBASIC17.54■□□□□ 0.4
Nup98Q6PFD9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup98Q6PFD9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nup98Q6PFD9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup98Q6PFD9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup98Q6PFD9 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.52■□□□□ 0.4
Nup98Q6PFD9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.52■□□□□ 0.4
Nup98Q6PFD9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms