Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Snrnp40Q6PE01 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.21□□□□□ -0.3
Snrnp40Q6PE01 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snrnp40Q6PE01 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snrnp40Q6PE01 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snrnp40Q6PE01 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Snrnp40Q6PE01 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Gm9719-201ENSMUST00000162765 543 ntBASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Gm24694-201ENSMUST00000180054 110 ntBASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Gm27663-201ENSMUST00000184839 110 ntBASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Gm6218-201ENSMUST00000219812 628 ntBASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snrnp40Q6PE01 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Gm5566-201ENSMUST00000116118 459 ntBASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Gm28631-201ENSMUST00000190740 334 ntBASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Gm43433-201ENSMUST00000196573 481 ntBASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Shd-206ENSMUST00000225145 998 ntBASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snrnp40Q6PE01 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snrnp40Q6PE01 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms