Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Gm7820-201ENSMUST00000121012 1052 ntBASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Chd4Q6PDQ2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Gm10275-202ENSMUST00000168697 495 ntBASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Gm10275-201ENSMUST00000092620 635 ntBASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chd4Q6PDQ2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Gm43438-201ENSMUST00000198133 379 ntBASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chd4Q6PDQ2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Gm9794-201ENSMUST00000202370 423 ntBASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Gm45453-201ENSMUST00000211758 853 ntBASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd4Q6PDQ2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Gm5763-201ENSMUST00000155951 1530 ntBASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Gm12138-201ENSMUST00000122180 951 ntBASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC19.4■□□□□ 0.7
Chd4Q6PDQ2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms