Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ShbQ6PD21 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ShbQ6PD21 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.1■□□□□ 0.17
ShbQ6PD21 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ShbQ6PD21 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.1■□□□□ 0.17
ShbQ6PD21 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ShbQ6PD21 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.1■□□□□ 0.17
ShbQ6PD21 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
ShbQ6PD21 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.1■□□□□ 0.17
ShbQ6PD21 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.1■□□□□ 0.17
ShbQ6PD21 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.1■□□□□ 0.17
ShbQ6PD21 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ShbQ6PD21 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ShbQ6PD21 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShbQ6PD21 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
ShbQ6PD21 Snora78-201ENSMUST00000158630 128 ntBASIC16.09■□□□□ 0.17
ShbQ6PD21 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.09■□□□□ 0.17
ShbQ6PD21 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.09■□□□□ 0.17
ShbQ6PD21 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.09■□□□□ 0.17
ShbQ6PD21 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.09■□□□□ 0.17
ShbQ6PD21 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.09■□□□□ 0.17
ShbQ6PD21 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.09■□□□□ 0.17
ShbQ6PD21 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
ShbQ6PD21 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.09■□□□□ 0.17
ShbQ6PD21 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.09■□□□□ 0.17
ShbQ6PD21 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShbQ6PD21 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ShbQ6PD21 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ShbQ6PD21 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ShbQ6PD21 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ShbQ6PD21 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ShbQ6PD21 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ShbQ6PD21 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.08■□□□□ 0.17
ShbQ6PD21 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ShbQ6PD21 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.08■□□□□ 0.16
ShbQ6PD21 Gm15393-201ENSMUST00000120499 219 ntBASIC16.08■□□□□ 0.16
ShbQ6PD21 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.08■□□□□ 0.16
ShbQ6PD21 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.08■□□□□ 0.16
ShbQ6PD21 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.08■□□□□ 0.16
ShbQ6PD21 Gm17420-201ENSMUST00000164753 153 ntBASIC16.08■□□□□ 0.16
ShbQ6PD21 Gm45784-201ENSMUST00000188360 142 ntBASIC16.08■□□□□ 0.16
ShbQ6PD21 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.08■□□□□ 0.16
ShbQ6PD21 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Gm17794-201ENSMUST00000220252 955 ntBASIC16.08■□□□□ 0.16
ShbQ6PD21 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
ShbQ6PD21 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.08■□□□□ 0.16
ShbQ6PD21 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ShbQ6PD21 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 BC001981-202ENSMUST00000191393 1545 ntBASIC16.08■□□□□ 0.16
ShbQ6PD21 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShbQ6PD21 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ShbQ6PD21 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ShbQ6PD21 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ShbQ6PD21 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ShbQ6PD21 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms