Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Gm5177-201ENSMUST00000183092 997 ntBASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Gm18246-201ENSMUST00000221023 728 ntBASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgb4Q6P8W9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.8■□□□□ 0.12
Hmgb4Q6P8W9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Gm11025-201ENSMUST00000140773 466 ntBASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgb4Q6P8W9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Auts2-212ENSMUST00000178555 309 ntBASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Gm27494-201ENSMUST00000184735 189 ntBASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgb4Q6P8W9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgb4Q6P8W9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmgb4Q6P8W9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmgb4Q6P8W9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Hmgb4Q6P8W9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms