Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.9■□□□□ 0.3
Abcf1Q6P542 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.9■□□□□ 0.3
Abcf1Q6P542 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Abcf1Q6P542 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Abcf1Q6P542 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Abcf1Q6P542 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.88■□□□□ 0.29
Abcf1Q6P542 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.88■□□□□ 0.29
Abcf1Q6P542 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Mir8098-201ENSMUST00000184011 137 ntBASIC16.88■□□□□ 0.29
Abcf1Q6P542 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Abcf1Q6P542 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Gm5864-201ENSMUST00000202263 970 ntBASIC16.87■□□□□ 0.29
Abcf1Q6P542 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.87■□□□□ 0.29
Abcf1Q6P542 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.87■□□□□ 0.29
Abcf1Q6P542 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Abcf1Q6P542 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Gm7461-201ENSMUST00000058918 827 ntBASIC16.86■□□□□ 0.29
Abcf1Q6P542 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abcf1Q6P542 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Abcf1Q6P542 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Abcf1Q6P542 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms