Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
ParpbpQ6IRT3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Gm44771-201ENSMUST00000206975 626 ntBASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ParpbpQ6IRT3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Gm8318-201ENSMUST00000182954 872 ntBASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.16□□□□□ -0.14
ParpbpQ6IRT3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Gm2651-201ENSMUST00000203560 838 ntBASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 AV026068-213ENSMUST00000223675 1171 ntBASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Gm15590-201ENSMUST00000078419 552 ntBASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ParpbpQ6IRT3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms