Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Clcn1Q64347 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Clcn1Q64347 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Gm2810-201ENSMUST00000118681 990 ntBASIC19.05■□□□□ 0.64
Clcn1Q64347 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
Clcn1Q64347 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Gm27437-201ENSMUST00000183429 107 ntBASIC19.05■□□□□ 0.64
Clcn1Q64347 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Clcn1Q64347 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.05■□□□□ 0.64
Clcn1Q64347 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Clcn1Q64347 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn1Q64347 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Clcn1Q64347 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.04■□□□□ 0.64
Clcn1Q64347 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.04■□□□□ 0.64
Clcn1Q64347 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Gm29541-201ENSMUST00000191351 678 ntBASIC19.04■□□□□ 0.64
Clcn1Q64347 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.04■□□□□ 0.64
Clcn1Q64347 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.04■□□□□ 0.64
Clcn1Q64347 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Clcn1Q64347 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.04■□□□□ 0.64
Clcn1Q64347 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clcn1Q64347 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Gm13015-201ENSMUST00000118674 204 ntBASIC19.03■□□□□ 0.64
Clcn1Q64347 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Clcn1Q64347 Gm27306-201ENSMUST00000183970 107 ntBASIC19.03■□□□□ 0.64
Clcn1Q64347 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.03■□□□□ 0.64
Clcn1Q64347 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
Clcn1Q64347 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Clcn1Q64347 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Clcn1Q64347 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Clcn1Q64347 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clcn1Q64347 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Clcn1Q64347 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.02■□□□□ 0.64
Clcn1Q64347 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.02■□□□□ 0.64
Clcn1Q64347 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.02■□□□□ 0.64
Clcn1Q64347 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clcn1Q64347 App-207ENSMUST00000227737 2827 ntBASIC19.02■□□□□ 0.64
Clcn1Q64347 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Clcn1Q64347 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clcn1Q64347 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clcn1Q64347 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clcn1Q64347 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clcn1Q64347 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms