Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
AtmQ62388 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.06□□□□□ -0.16
AtmQ62388 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.06□□□□□ -0.16
AtmQ62388 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.06□□□□□ -0.16
AtmQ62388 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Dancr-204ENSMUST00000132389 2347 ntBASIC14.06□□□□□ -0.16
AtmQ62388 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
AtmQ62388 Gm16570-201ENSMUST00000161951 436 ntBASIC14.06□□□□□ -0.16
AtmQ62388 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
AtmQ62388 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AtmQ62388 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
AtmQ62388 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.06□□□□□ -0.16
AtmQ62388 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.06□□□□□ -0.16
AtmQ62388 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
AtmQ62388 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.06□□□□□ -0.16
AtmQ62388 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AtmQ62388 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
AtmQ62388 Mir6392-201ENSMUST00000184924 108 ntBASIC14.05□□□□□ -0.16
AtmQ62388 Gm10766-202ENSMUST00000194123 606 ntBASIC14.05□□□□□ -0.16
AtmQ62388 Gm37917-201ENSMUST00000194711 392 ntBASIC14.05□□□□□ -0.16
AtmQ62388 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.05□□□□□ -0.16
AtmQ62388 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.05□□□□□ -0.16
AtmQ62388 Gm5187-201ENSMUST00000117317 991 ntBASIC14.05□□□□□ -0.16
AtmQ62388 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
AtmQ62388 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
AtmQ62388 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
AtmQ62388 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.04□□□□□ -0.16
AtmQ62388 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
AtmQ62388 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Gm14660-201ENSMUST00000119809 575 ntBASIC14.04□□□□□ -0.16
AtmQ62388 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
AtmQ62388 Gm37466-201ENSMUST00000195692 652 ntBASIC14.04□□□□□ -0.16
AtmQ62388 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.04□□□□□ -0.16
AtmQ62388 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.04□□□□□ -0.16
AtmQ62388 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
AtmQ62388 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
AtmQ62388 Gm27731-201ENSMUST00000185192 107 ntBASIC14.04□□□□□ -0.16
AtmQ62388 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.04□□□□□ -0.16
AtmQ62388 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
AtmQ62388 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.04□□□□□ -0.16
AtmQ62388 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Gm23931-201ENSMUST00000103842 109 ntBASIC14.04□□□□□ -0.16
AtmQ62388 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.04□□□□□ -0.16
AtmQ62388 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.04□□□□□ -0.16
AtmQ62388 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AtmQ62388 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
AtmQ62388 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.03□□□□□ -0.16
AtmQ62388 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AtmQ62388 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms