Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sycp1Q62209 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sycp1Q62209 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Sycp1Q62209 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sycp1Q62209 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sycp1Q62209 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sycp1Q62209 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Sycp1Q62209 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.92■□□□□ 0.3
Sycp1Q62209 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sycp1Q62209 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sycp1Q62209 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.92■□□□□ 0.3
Sycp1Q62209 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sycp1Q62209 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.92■□□□□ 0.3
Sycp1Q62209 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sycp1Q62209 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.92■□□□□ 0.3
Sycp1Q62209 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sycp1Q62209 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sycp1Q62209 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.92■□□□□ 0.3
Sycp1Q62209 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sycp1Q62209 Gm5682-201ENSMUST00000173402 505 ntBASIC16.92■□□□□ 0.3
Sycp1Q62209 Gm18733-201ENSMUST00000173950 856 ntBASIC16.92■□□□□ 0.3
Sycp1Q62209 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.92■□□□□ 0.3
Sycp1Q62209 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sycp1Q62209 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sycp1Q62209 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.92■□□□□ 0.3
Sycp1Q62209 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.92■□□□□ 0.3
Sycp1Q62209 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sycp1Q62209 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sycp1Q62209 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Sycp1Q62209 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sycp1Q62209 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.91■□□□□ 0.3
Sycp1Q62209 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Sycp1Q62209 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sycp1Q62209 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.91■□□□□ 0.3
Sycp1Q62209 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sycp1Q62209 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.9■□□□□ 0.3
Sycp1Q62209 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.9■□□□□ 0.3
Sycp1Q62209 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.9■□□□□ 0.3
Sycp1Q62209 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.9■□□□□ 0.3
Sycp1Q62209 AV026068-213ENSMUST00000223675 1171 ntBASIC16.9■□□□□ 0.3
Sycp1Q62209 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Sycp1Q62209 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.9■□□□□ 0.3
Sycp1Q62209 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sycp1Q62209 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Sycp1Q62209 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sycp1Q62209 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sycp1Q62209 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms