Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.74■□□□□ 0.43
Ctr9Q62018 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Gm11025-201ENSMUST00000140773 466 ntBASIC17.74■□□□□ 0.43
Ctr9Q62018 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.74■□□□□ 0.43
Ctr9Q62018 Gm26308-201ENSMUST00000157768 69 ntBASIC17.74■□□□□ 0.43
Ctr9Q62018 Gm27494-201ENSMUST00000184735 189 ntBASIC17.74■□□□□ 0.43
Ctr9Q62018 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.74■□□□□ 0.43
Ctr9Q62018 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ctr9Q62018 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ctr9Q62018 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Ctr9Q62018 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ctr9Q62018 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctr9Q62018 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Celf4-206ENSMUST00000224553 1729 ntBASIC17.73■□□□□ 0.43
Ctr9Q62018 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.73■□□□□ 0.43
Ctr9Q62018 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.73■□□□□ 0.43
Ctr9Q62018 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.73■□□□□ 0.43
Ctr9Q62018 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.73■□□□□ 0.43
Ctr9Q62018 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctr9Q62018 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ctr9Q62018 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ctr9Q62018 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Ctr9Q62018 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Gm13365-201ENSMUST00000121188 973 ntBASIC17.72■□□□□ 0.43
Ctr9Q62018 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.72■□□□□ 0.43
Ctr9Q62018 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.72■□□□□ 0.43
Ctr9Q62018 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.72■□□□□ 0.43
Ctr9Q62018 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.72■□□□□ 0.43
Ctr9Q62018 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ctr9Q62018 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ctr9Q62018 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ctr9Q62018 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctr9Q62018 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.71■□□□□ 0.43
Ctr9Q62018 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.71■□□□□ 0.43
Ctr9Q62018 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Mir1895-201ENSMUST00000122615 79 ntBASIC17.71■□□□□ 0.43
Ctr9Q62018 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ctr9Q62018 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.71■□□□□ 0.43
Ctr9Q62018 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.71■□□□□ 0.43
Ctr9Q62018 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ctr9Q62018 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ctr9Q62018 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctr9Q62018 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms