Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Ccne1Q61457 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Ccne1Q61457 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.52■□□□□ 0.72
Ccne1Q61457 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Gm5745-201ENSMUST00000183748 313 ntBASIC19.52■□□□□ 0.72
Ccne1Q61457 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.52■□□□□ 0.72
Ccne1Q61457 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccne1Q61457 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccne1Q61457 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccne1Q61457 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccne1Q61457 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ccne1Q61457 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccne1Q61457 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccne1Q61457 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ccne1Q61457 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Gm6539-201ENSMUST00000119157 1064 ntBASIC19.51■□□□□ 0.71
Ccne1Q61457 Gm15487-201ENSMUST00000122373 465 ntBASIC19.51■□□□□ 0.71
Ccne1Q61457 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccne1Q61457 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.51■□□□□ 0.71
Ccne1Q61457 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccne1Q61457 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.51■□□□□ 0.71
Ccne1Q61457 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.5■□□□□ 0.71
Ccne1Q61457 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccne1Q61457 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.5■□□□□ 0.71
Ccne1Q61457 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.5■□□□□ 0.71
Ccne1Q61457 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccne1Q61457 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccne1Q61457 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccne1Q61457 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccne1Q61457 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.5■□□□□ 0.71
Ccne1Q61457 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ccne1Q61457 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccne1Q61457 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccne1Q61457 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccne1Q61457 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccne1Q61457 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccne1Q61457 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.49■□□□□ 0.71
Ccne1Q61457 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccne1Q61457 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccne1Q61457 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccne1Q61457 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccne1Q61457 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.49■□□□□ 0.71
Ccne1Q61457 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.49■□□□□ 0.71
Ccne1Q61457 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccne1Q61457 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC19.49■□□□□ 0.71
Ccne1Q61457 Gm14767-201ENSMUST00000121559 586 ntBASIC19.49■□□□□ 0.71
Ccne1Q61457 Gm5479-201ENSMUST00000160578 435 ntBASIC19.49■□□□□ 0.71
Ccne1Q61457 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccne1Q61457 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccne1Q61457 Gm7775-201ENSMUST00000218871 853 ntBASIC19.49■□□□□ 0.71
Ccne1Q61457 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccne1Q61457 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.49■□□□□ 0.71
Ccne1Q61457 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccne1Q61457 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccne1Q61457 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccne1Q61457 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccne1Q61457 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccne1Q61457 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccne1Q61457 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccne1Q61457 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ccne1Q61457 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccne1Q61457 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccne1Q61457 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccne1Q61457 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccne1Q61457 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccne1Q61457 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccne1Q61457 Gm27680-201ENSMUST00000184192 160 ntBASIC19.48■□□□□ 0.71
Ccne1Q61457 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms