Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ripk1Q60855 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ripk1Q60855 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ripk1Q60855 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Gm18489-201ENSMUST00000172565 551 ntBASIC14.23□□□□□ -0.13
Ripk1Q60855 Gm7230-201ENSMUST00000173026 815 ntBASIC14.23□□□□□ -0.13
Ripk1Q60855 Gm37153-201ENSMUST00000193637 231 ntBASIC14.23□□□□□ -0.13
Ripk1Q60855 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ripk1Q60855 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.23□□□□□ -0.13
Ripk1Q60855 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ripk1Q60855 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ripk1Q60855 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.22□□□□□ -0.13
Ripk1Q60855 Gm7862-201ENSMUST00000121461 292 ntBASIC14.22□□□□□ -0.13
Ripk1Q60855 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.22□□□□□ -0.13
Ripk1Q60855 Mir8098-201ENSMUST00000184011 137 ntBASIC14.22□□□□□ -0.13
Ripk1Q60855 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ripk1Q60855 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ripk1Q60855 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.22□□□□□ -0.13
Ripk1Q60855 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ripk1Q60855 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.22□□□□□ -0.13
Ripk1Q60855 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ripk1Q60855 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ripk1Q60855 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.21□□□□□ -0.13
Ripk1Q60855 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.21□□□□□ -0.13
Ripk1Q60855 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.21□□□□□ -0.13
Ripk1Q60855 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.21□□□□□ -0.13
Ripk1Q60855 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.21□□□□□ -0.13
Ripk1Q60855 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.21□□□□□ -0.13
Ripk1Q60855 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ripk1Q60855 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Ripk1Q60855 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ripk1Q60855 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ripk1Q60855 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ripk1Q60855 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.21□□□□□ -0.14
Ripk1Q60855 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ripk1Q60855 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ripk1Q60855 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ripk1Q60855 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ripk1Q60855 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ripk1Q60855 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.2□□□□□ -0.14
Ripk1Q60855 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ripk1Q60855 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ripk1Q60855 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ripk1Q60855 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms