Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NfkbibQ60778 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
NfkbibQ60778 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.07■□□□□ 0.48
NfkbibQ60778 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
NfkbibQ60778 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NfkbibQ60778 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Gm43474-201ENSMUST00000196415 774 ntBASIC18.07■□□□□ 0.48
NfkbibQ60778 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.07■□□□□ 0.48
NfkbibQ60778 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NfkbibQ60778 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfkbibQ60778 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.07■□□□□ 0.48
NfkbibQ60778 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NfkbibQ60778 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
NfkbibQ60778 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
NfkbibQ60778 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.06■□□□□ 0.48
NfkbibQ60778 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.06■□□□□ 0.48
NfkbibQ60778 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NfkbibQ60778 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.06■□□□□ 0.48
NfkbibQ60778 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.06■□□□□ 0.48
NfkbibQ60778 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.06■□□□□ 0.48
NfkbibQ60778 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
NfkbibQ60778 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NfkbibQ60778 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.06■□□□□ 0.48
NfkbibQ60778 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.05■□□□□ 0.48
NfkbibQ60778 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfkbibQ60778 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfkbibQ60778 Gm43125-201ENSMUST00000201724 730 ntBASIC18.05■□□□□ 0.48
NfkbibQ60778 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
NfkbibQ60778 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NfkbibQ60778 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfkbibQ60778 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfkbibQ60778 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NfkbibQ60778 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfkbibQ60778 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfkbibQ60778 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfkbibQ60778 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NfkbibQ60778 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.04■□□□□ 0.48
NfkbibQ60778 Gm14701-201ENSMUST00000117156 348 ntBASIC18.04■□□□□ 0.48
NfkbibQ60778 Gm2810-201ENSMUST00000118681 990 ntBASIC18.04■□□□□ 0.48
NfkbibQ60778 Gm11543-201ENSMUST00000120758 370 ntBASIC18.04■□□□□ 0.48
NfkbibQ60778 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.04■□□□□ 0.48
NfkbibQ60778 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
NfkbibQ60778 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.04■□□□□ 0.48
NfkbibQ60778 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.04■□□□□ 0.48
NfkbibQ60778 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Gm5312-201ENSMUST00000203728 547 ntBASIC18.04■□□□□ 0.48
NfkbibQ60778 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.04■□□□□ 0.48
NfkbibQ60778 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfkbibQ60778 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NfkbibQ60778 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NfkbibQ60778 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.03■□□□□ 0.48
NfkbibQ60778 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NfkbibQ60778 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
NfkbibQ60778 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.03■□□□□ 0.48
NfkbibQ60778 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NfkbibQ60778 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms