Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Gm27702-201ENSMUST00000184512 56 ntBASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Gm44492-201ENSMUST00000197012 141 ntBASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Thap2-203ENSMUST00000218989 527 ntBASIC14.18□□□□□ -0.14
Tnfaip3Q60769 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfaip3Q60769 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfaip3Q60769 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.17□□□□□ -0.14
Tnfaip3Q60769 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Gm2272-201ENSMUST00000194903 582 ntBASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Gm45747-201ENSMUST00000212203 999 ntBASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfaip3Q60769 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Tnfaip3Q60769 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfaip3Q60769 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfaip3Q60769 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Tnfaip3Q60769 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfaip3Q60769 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfaip3Q60769 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms