Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.48□□□□□ -0.09
ClpbQ60649 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.48□□□□□ -0.09
ClpbQ60649 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ClpbQ60649 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Grk6-207ENSMUST00000225925 2769 ntBASIC14.47□□□□□ -0.09
ClpbQ60649 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ClpbQ60649 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Gm27525-201ENSMUST00000184465 107 ntBASIC14.47□□□□□ -0.09
ClpbQ60649 Gm8000-201ENSMUST00000188378 592 ntBASIC14.47□□□□□ -0.09
ClpbQ60649 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.47□□□□□ -0.09
ClpbQ60649 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.47□□□□□ -0.09
ClpbQ60649 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.47□□□□□ -0.09
ClpbQ60649 Gm7787-201ENSMUST00000216858 688 ntBASIC14.47□□□□□ -0.09
ClpbQ60649 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.47□□□□□ -0.09
ClpbQ60649 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.47□□□□□ -0.09
ClpbQ60649 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
ClpbQ60649 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.47□□□□□ -0.09
ClpbQ60649 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ClpbQ60649 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ClpbQ60649 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.47□□□□□ -0.09
ClpbQ60649 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.47□□□□□ -0.09
ClpbQ60649 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClpbQ60649 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ClpbQ60649 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ClpbQ60649 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ClpbQ60649 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ClpbQ60649 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ClpbQ60649 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ClpbQ60649 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.46□□□□□ -0.09
ClpbQ60649 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.46□□□□□ -0.09
ClpbQ60649 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.46□□□□□ -0.09
ClpbQ60649 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.46□□□□□ -0.09
ClpbQ60649 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.46□□□□□ -0.09
ClpbQ60649 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.46□□□□□ -0.09
ClpbQ60649 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.46□□□□□ -0.09
ClpbQ60649 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ClpbQ60649 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
ClpbQ60649 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ClpbQ60649 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClpbQ60649 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ClpbQ60649 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ClpbQ60649 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.45□□□□□ -0.1
ClpbQ60649 Gm12260-201ENSMUST00000122447 411 ntBASIC14.45□□□□□ -0.1
ClpbQ60649 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
ClpbQ60649 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ClpbQ60649 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.45□□□□□ -0.1
ClpbQ60649 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.45□□□□□ -0.1
ClpbQ60649 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClpbQ60649 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms