Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm23689-201ENSMUST00000180354 110 ntBASIC15.62■□□□□ 0.09
Satb1Q60611 Gm27359-201ENSMUST00000184153 110 ntBASIC15.62■□□□□ 0.09
Satb1Q60611 Gm27785-201ENSMUST00000184268 110 ntBASIC15.62■□□□□ 0.09
Satb1Q60611 Gm27466-201ENSMUST00000184396 110 ntBASIC15.62■□□□□ 0.09
Satb1Q60611 Gm27703-201ENSMUST00000184836 110 ntBASIC15.62■□□□□ 0.09
Satb1Q60611 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.62■□□□□ 0.09
Satb1Q60611 Gm9682-201ENSMUST00000197505 556 ntBASIC15.62■□□□□ 0.09
Satb1Q60611 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.62■□□□□ 0.09
Satb1Q60611 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.62■□□□□ 0.09
Satb1Q60611 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Satb1Q60611 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Satb1Q60611 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Satb1Q60611 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Satb1Q60611 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Satb1Q60611 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Satb1Q60611 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Satb1Q60611 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Satb1Q60611 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Satb1Q60611 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Satb1Q60611 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Satb1Q60611 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.61■□□□□ 0.09
Satb1Q60611 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.61■□□□□ 0.09
Satb1Q60611 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.61■□□□□ 0.09
Satb1Q60611 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Satb1Q60611 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.61■□□□□ 0.09
Satb1Q60611 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.61■□□□□ 0.09
Satb1Q60611 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.61■□□□□ 0.09
Satb1Q60611 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Satb1Q60611 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
Satb1Q60611 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Satb1Q60611 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.61■□□□□ 0.09
Satb1Q60611 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Satb1Q60611 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Satb1Q60611 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Satb1Q60611 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Satb1Q60611 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Satb1Q60611 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Satb1Q60611 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.6■□□□□ 0.09
Satb1Q60611 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Mir8102-201ENSMUST00000184148 139 ntBASIC15.6■□□□□ 0.09
Satb1Q60611 Gm20553-201ENSMUST00000204205 844 ntBASIC15.6■□□□□ 0.09
Satb1Q60611 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.6■□□□□ 0.09
Satb1Q60611 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.6■□□□□ 0.09
Satb1Q60611 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Satb1Q60611 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Satb1Q60611 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Satb1Q60611 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.59■□□□□ 0.09
Satb1Q60611 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Satb1Q60611 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Satb1Q60611 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Satb1Q60611 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Satb1Q60611 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Satb1Q60611 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Satb1Q60611 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Satb1Q60611 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.59■□□□□ 0.09
Satb1Q60611 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Satb1Q60611 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Satb1Q60611 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Satb1Q60611 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms